HGT-Start

Notifications Mark All as Read

HGTStart is now Online

2 hrs ago

This is a TEST message

2 hrs ago

View All

Detail information of HGT record

HGT / Viridiplantae--Streptophyta--Raphanus_sativus.XP_018449135.1@@3726

Gene Information

HGT gene information.

Gene Name

XP_018449135.1
Donor Node

asReceptor
Donor Node

Eukaryota.Chromalveolate.Chromalveolate
DN time

1490.0
Receptor Node

Eukaryota.Viridiplantae.Streptophyta.malvids
RN time

106.0
MSMH OUT

Chromalveolata.Haptophyceae--Pavlovales--Pavlova_gyrans.CCMP608.58964_1@@44452
AI(CHE)

15.08(100.0)
hU(CHS)

77.0(100.0)
hBL(CHBL)

96.72(100.0)
Node Level

1

MSMH IN

Viridiplantae--Tracheophyta--Raphasa.XP_018449135.1@@3726
Viridiplantae--Tracheophyta--Eutresa.XP_006412048.1@@72664
Plantae.Viridiplantae--Brassical--Brassica_oleracea.XP_013621719.1@@3712
Plantae.Viridiplantae--Brassical--Brassica_napus.XP_013656482.1@@3708
Plantae.Viridiplantae--Brassical--Brassica_napus.XP_013748847.1@@3708
Plantae.Viridiplantae--Brassical--Camelina_sativa.XP_010437404.1@@90675
Plantae.Viridiplantae--Brassical--Brassica_napus.XP_013642733.1@@3708
Plantae.Viridiplantae--Brassical--Brassica_oleracea.XP_013598855.1@@3712
Plantae.Viridiplantae--Brassical--Arabidopsis_lyrata.XP_002869052.1@@59689
Plantae.Viridiplantae--Brassical--Capsella_rubella.XP_006283537.1@@81985
Plantae.Viridiplantae--Brassical--Brassica_oleracea.XP_013605776.1@@3712
Plantae.Viridiplantae--Malvales--Theobroma_cacao.XP_007046622.2@@3641

Gene Annotation

Basic annotation, like KEGG, Gene Ontology etc.

OG1157 Term

OG.1185
EGGNOG Term

COG5193@1|root,KOG2590@2759|Eukaryota,37J6N@33090|Viridiplantae,3G81R@35493|Streptophyta,3HUAZ@3699|Brassicales
PANTHER Term

PTHR22792:SF126
Super Family Term

SSF46785
Interproscan Term
- ['IPR036390']
GO Term
- GO:0001101
- GO:0003674
- GO:0003676
- GO:0003723
- GO:0003729
- GO:0005488
- GO:0005575
- GO:0005622
- GO:0005623
- GO:0005737
- GO:0005844
- GO:0007275
- GO:0007568
- GO:0008150
- GO:0009719
- GO:0009725
- GO:0009737
- GO:0009751
- GO:0009753
- GO:0010033
- GO:0010150
- GO:0014070
- GO:0032501
- GO:0032502
- GO:0032991
- GO:0033993
- GO:0042221
- GO:0042493
- GO:0044424
- GO:0044464
- GO:0046677
- GO:0048366
- GO:0048367
- GO:0048731
- GO:0048827
- GO:0048856
- GO:0050896
- GO:0090693
- GO:0097159
- GO:0097305
- GO:0099402
- GO:1901363
- GO:1901700
- GO:1990904
Pfam Term
- PF05383